In Silico Mining of Simple Sequence Repeats in Whole Genome of Xanthomonas sp.
نویسندگان
چکیده
منابع مشابه
Mining of Simple Sequence Repeats in Chloroplast Genome Sequence of Cocos Nucifera
Received: 17, March, 2015 Final Accepted: 17, April, 2015 Published Online: 25, April, 2015 Simple sequence repeats (SSRs), also known as microsatellites, are found in DNA sequences and consist of short repeating motifs of 1-6 nucleotides. These repeats are ubiquitous and play an important role in the development of molecular markers. Therefore, the present analysis was conducted to mine SSRs i...
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Simple sequence repeat (SSR) or microsatellite markers, are a valuable tool for several purposes such as evaluation of genetic diversity, fingerprinting, marker assisted selection, and breeding. Recent developments in sequencing technologies and bioinformatics analyses provide new opportunity to produce a high number of less costly SSRs. Here, we used for the first time a wholegenome shotgun se...
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The abundance and inherent potential for extensive allelic variations in simple sequence repeats (SSRs) or microsatellites resulted in valuable source for genetic markers in eukaryotes. In this study, we analyzed and compared the abundance and organisation of SSR in the genome of two important fungal pathogens of wheat, brown or leaf rust (Puccinia triticina) and black or stem rust (Puccinia gr...
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15 صفحه اولEvolution Analysis of Simple Sequence Repeats in Plant Genome
Simple sequence repeats (SSRs) are widespread units on genome sequences, and play many important roles in plants. In order to reveal the evolution of plant genomes, we investigated the evolutionary regularities of SSRs during the evolution of plant species and the plant kingdom by analysis of twelve sequenced plant genome sequences. First, in the twelve studied plant genomes, the main SSRs were...
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ژورنال
عنوان ژورنال: Journal of Computer Science & Systems Biology
سال: 2014
ISSN: 0974-7230
DOI: 10.4172/jcsb.1000157